Citing iPathwayGuide™

Using Advaita Bio’s products or content for any form of publication (e.g. print, electronically) requires researchers to cite them. Please use one of the options below for citations:

– Functional analysis [Target analysis/Impact analysis/Molecular Signature analysis/Gene Ontology Term Enrichment analysis/Upstream gene analysis etc] was done using iPathwayGuide™TM (AdvaitaBio Corporation, https://ipathwayguide.advaitabio.com/) [Reference 1 and Reference 2].
– DEGs were analysed using iPathwayGuide™TM (AdvaitaBio Corporation, https://ipathwayguide.advaitabio.com/)[Reference 1 and Reference 2].
– The [Chord Diagrams, Pathway Image, Network image etc.] were generated using iPathwayGuide™TM (AdvaitaBio Corporation, https://ipathwayguide.advaitabio.com/)[Reference 1 and Reference 2].

References:

  1. Draghici S, Khatri P, Tarca AL, Amin K, Done A, Voichita C, Georgescu C, Romero R. A systems biology approach for pathway level analysis. Genome Res. 2007 Oct;17(10):1537-45. doi: 10.1101/gr.6202607. Epub 2007 Sep 4. PMID: 17785539; PMCID: PMC1987343.
  2. Donato M, Xu Z, Tomoiaga A, Granneman JG, Mackenzie RG, Bao R, Than NG, Westfall PH, Romero R, Draghici S. Analysis and correction of crosstalk effects in pathway analysis. Genome Res. 2013 Nov;23(11):1885-93. doi: 10.1101/gr.153551.112. Epub 2013 Aug 9. PMID: 23934932; PMCID: PMC3814888.

If you need additional explanation on how the methods work or if you ever have any scientific questions from the reviewers about the analysis, we will be happy to help preparing the response to reviewers.