Getting Started with iPathwayGuide™
1. iPathwayGuide™ expects the following three items in your differential expression input file:Gene SymbolLog Fold ChangeP-value (adjusted P-value recommended)2. iPathwayGuide™ accepts several file formats for RNA-Seq, microarrays, and proteomic profiling. Refer to the full list of accepted data formats on [...]
Disease Analysis
The differential expression data can yield insights on potential diseases enriched in the sample data. Such conclusions can be drawn by observing the number of differentially expressed genes or proteins in your data. One such computational approach is described below. [...]
Understanding Gene Ontology Analysis
Understanding Gene Ontology Analysis What is Gene Ontology (GO)? The confusion about gene ontology and gene ontology analysis can start right from the term itself. There are actually two different entities that [...]
Advaita’s iPathwayGuide™ – Combining Sciex SWATH 2.0 Data and mRNA Data
Advaita has teamed up with SCIEX, the leader in Data Independent Acquisition (DIA) Mass Spectrometry for the collection and analysis of proteomics-based data. Through this collaboration, users can now bring their SWATH data from the SCIEX protein expression workflow [...]
Uploading Affymetrix CEL files in iPathwayGuide™
iPathwayGuide™ – Affy CEL file uploading Affymetrix microarrays are one of the most widely used gene expression platforms in the industry. iPathwayGuide™ supports the most common platforms. Look at the FAQ for the latest list of supported platforms.The resulting [...]